PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca21771.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family NAC
Protein Properties Length: 379aa    MW: 43554.2 Da    PI: 4.7589
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca21771.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.12.4e-21271472128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv..ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk.evlskkg 97 
                 p G+rF+P d+ +  +yL +k+ g ++++   i ++++y     P++L    ++++++ yfF+k +kk+++ +r  r++  g+W+ + +++ ++   ++
  Dca21771.1  27 PIGYRFKPDDHMIFEHYLPRKILGYPVTF---IGDIELYGDnqSPNNLF--GSSDDTDFYFFTKLKKKKKNHERVIRTAGGGTWRGQNQEQhDIEI-GE 119
                 89************************776...899999854238****6..346889****************************77765515555.44 PP

         NAM  98 el..vglkktLvfykgrapkgektdWvmheyrl 128
                 el  +g+k+ ++++k      ++ +Wvmheyr+
  Dca21771.1 120 ELipIGTKRAFTYHKS-----KQDSWVMHEYRI 147
                 44459*********43.....3567******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-2222157IPR003441NAC domain
PROSITE profilePS5100524.9826187IPR003441NAC domain
PfamPF023655.3E-1727147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MESSSTIIQS PPSTSYTNNH NENTFIPIGY RFKPDDHMIF EHYLPRKILG YPVTFIGDIE  60
LYGDNQSPNN LFGSSDDTDF YFFTKLKKKK KNHERVIRTA GGGTWRGQNQ EQHDIEIGEE  120
LIPIGTKRAF TYHKSKQDSW VMHEYRIDNT YVNYVMHGSN TSVYSLTPDK LPNLNPDDIV  180
FCHVSNKSKK DAQGKLKRAL VQNHPLPCKK QKVAHNNCVD NVTQLNSTRV NDFVNNNVEN  240
DSLHELLIKN FDNFSSTEDE LKEQLIMRSH GQVEKDVHKF YKNVCDSEEP THEGQNTLTS  300
TSEDQDDEVE VDWLDIIASS SVQQQQQEEE NTQWTQEMMD DDFILMPVTE EEIDIVAECS  360
MKNPELLGAS VVHQPLSCA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-142618715168Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.12e-16NAC domain containing protein 102